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VMD tutorials developed locally, and by the research community at large.ĭeveloper: University of Illinois at Urbana-Champaign.

Integration with the program NAMD, a fast, parallel, and scalable molecular dynamics program.

VMD TUTORIALS CODE

Modular, extensible source code using an object-oriented design in C++, with a programmers guide describing the program architecture and source code.

Extensions to the Tcl language which enable researchers to write their own routines for molecular analysis.

User-extensible graphical and text-based user interfaces, built-on standard Tcl/Tk and Python scripting languages.

Ability to export displayed graphics to files which may be processed by a number of popular ray tracing and image rendering packages, including POV-Ray, Rayshade, Raster3D, and Tachyon.

Support for over 60 molecular file formats and data types through an extensive library of built-in file reader/writer plugins and translators VMD includes a multiple sequence alignment plugin, a unified bioinformatics analysis environment that allows one to organize, display, and analyze both sequence and structure data for proteins and nucleic acids.

Extensive atom selection syntax for choosing subsets of atoms for display (includes boolean operators, regular expressions, and more).

Many molecular rendering and coloring methods including support for high-quality molecular scene rendering using Tachyon, NVIDIA Gelato, and PIXAR RenderMan.

VMD TUTORIALS PDF

Rendering mode which supports scene capture with Adobe Acrobat3D, allowing researchers to create PDF documents containing 3-D scenes from VMD.

No limits on the number of molecules, atoms, residues or number of trajectory frames, except available memory.

Support for GPU accelerated computation.